MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Micrococcus yunnanensis
19428wG4_IOV6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 248
bases: 2,477,181 bps
CDS: 2,232
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,285
Total number of protein coding genes annotated/found:
2,232
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5018|JADGKS010000048.1
SEQF5018_01452
Genome Viewer
NA
AA
219/73
61-279
IS3 family transposase ISPfr13
SEQF5018|JADGKS010000048.1
SEQF5018_01453
Genome Viewer
NA
AA
723/241
965-243
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01454
Genome Viewer
NA
AA
837/279
1798-962
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01455
Genome Viewer
NA
AA
963/321
2852-1890
IS481 family transposase ISKrh2
SEQF5018|JADGKS010000048.1
SEQF5018_01457
Genome Viewer
NA
AA
666/222
3843-4508
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01458
Genome Viewer
NA
AA
1911/637
6489-4579
DNA primase
SEQF5018|JADGKS010000048.1
SEQF5018_01459
Genome Viewer
NA
AA
246/82
6765-6520
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01460
Genome Viewer
NA
AA
1032/344
7859-6828
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01461
Genome Viewer
NA
AA
1584/528
7913-9496
Isochorismate synthase MenF
SEQF5018|JADGKS010000048.1
SEQF5018_01462
Genome Viewer
NA
AA
903/301
9610-10512
NAD-dependent protein deacylase
SEQF5018|JADGKS010000048.1
SEQF5018_01463
Genome Viewer
NA
AA
1407/469
11845-10439
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
SEQF5018|JADGKS010000048.1
SEQF5018_01464
Genome Viewer
NA
AA
1308/436
13145-11838
putative tRNA-dihydrouridine synthase
SEQF5018|JADGKS010000048.1
SEQF5018_01465
Genome Viewer
NA
AA
417/139
13669-13253
hypothetical protein
SEQF5018|JADGKS010000048.1
SEQF5018_01466
Genome Viewer
NA
AA
1023/341
13809-14831
F420-dependent glucose-6-phosphate dehydrogenase
SEQF5018|JADGKS010000181.1
SEQF5018_00682
Genome Viewer
NA
AA
318/106
245-562
hypothetical protein
SEQF5018|JADGKS010000181.1
SEQF5018_00683
Genome Viewer
NA
AA
1287/429
564-1850
hypothetical protein
SEQF5018|JADGKS010000181.1
SEQF5018_00684
Genome Viewer
NA
AA
774/258
1847-2620
D-aminoacyl-tRNA deacylase
SEQF5018|JADGKS010000024.1
SEQF5018_00934
Genome Viewer
NA
AA
750/250
1849-1100
hypothetical protein
SEQF5018|JADGKS010000024.1
SEQF5018_00935
Genome Viewer
NA
AA
795/265
2687-1893
putative oxidoreductase
SEQF5018|JADGKS010000024.1
SEQF5018_00936
Genome Viewer
NA
AA
2685/895
2827-5511
Valine--tRNA ligase
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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